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Pepsin

UniProt P0DJD7 · 388 residues

Where the model is sure, and where it is unsure

N (residue 1)C (residue 388)

  • Very high (90 and above): 290 residues
  • Confident (70 to 90): 69 residues
  • Low (50 to 70): 21 residues
  • Very low (below 50): 8 residues

This is the model's confidence in its own prediction (pLDDT), not how good or bad the protein is. Very low confidence often marks a flexible or disordered stretch, not an error.

In your words, what does it do?

Where is the model sure, and where unsure? Use the strip.